Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791181.1_cds_XP_016505808.1_1832
CDS Infomation

[gene=LOC107823625] [db_xref=GeneID:107823625] [protein=aldehyde dehydrogenase family 3 member F1-like isoform X2] [protein_id=XP_016505808.1] [location=join(33240..33428,34552..34620,35387..35483,35728..35934,36118..36242,36518..36622,36755..36927,36999..37089,37248..37397,37503..37763)] [gbkey=CDS]
Sequence

ATGGATAGAGTCGAAGAAATGTTAGGAGAAGTGAGAAGAACATTCAAGGGAGGAAGAACA
AGAGGGGTTGAATGGAGGAAAGCACAGCTTCAAGCCCTTCTCAACCTCCTTGCTGAAAAT
GAAGATAAAATCATCGAAGCACTTAGACAGGATCTTGGGAAGCATCCTGTTGAAGCTTAC
CGTGATGAAGTTGGGGTGGTGAAAAAATCAGCTACCAATGCTTTCCGCTGTGTTGAGAAG
TGGATGGCCCCTCAAAAGGGCCGGATACCAGTAGTTTTCTTTCCTGCAAGAGGGGCAGTA
GTATCAGAGCCACTTGGAGTAGTACTCATATTTGCATCCTGGAATTTTCCCATCTCCCTA
GCTTTAGACCCAGTGATTGGAGCAATTTCGGCTGGAAACACAGTTGTCCTCAAACCTTCA
GACTTAGCACCAAAATGCTCCTCTTTTCTAGCCAATACAATACCTCTTTACTTGGATCCA
GAAGCTATTAAAGTTGTCGAAGGTGGAAAAGACATATCAGAACAGCTGTTGCAGCTAAAA
TGGGATAAGATATTTTTTACAGGTAGTCCACAAGTTGCGCGCCTCATAATGTCAGCAGCT
GCGAAGCACTTAACACCTGTAACTCTAGAACTGGGTGGAAAATGTCCGACCATCCTTGAC
ACTCTATCAAATTCCTCCGATTTACAGGTGGCTGTCAAAAGGATAGTGGGTGGCAAGTGG
GGACCATGCAACGGACAAGCATGCATAGGAATCGATTATGTGCTCGTGGAAACACAATTT
GCTCCAGTTCTGATCGAACTATTGAAGAAGTTCATCAAGAGATTTTATGGTGAAAACCTG
AAAACTTTGGAAAATCTCGCCAGAATCGTGAACAAGCACCATTTTGAAAGAGTTCACAAC
CTTCTGAAAGATCCGAATGTTGCAGCAACCATTGTTTATGGAGGCTCAGTTGATGAGGAA
AATATGGTTATTGAGCCAACAATCTTGTTGAATCCTCCTCTTGATGCTGAGATCATGACT
GAAGAAATATTTGGCCCATTGCTTCCTATCATCACACTAAATACTATTGAAGAAAGCATT
CAGTTCATAAACTCGAGGCCAAAACCTCTAGCAATATATGCATTTACCAAGAACGATTCG
TTGAAGGAGAAGATCTTGCAGGAAACATCTTCTGGAAGTCTGACTTTCAATGATGCTATA
ATTCAGTTTGTAGCTGACACATTACCATTCGGAGGCGTTGGTCAGAGTGGTTTCGGACGT
TACCATGGGAAGTTCTCTTTTGACACATTCAGTCACGAAAAAGCAGTTCTACATAGGAGT
TTCTTAATTGAGCTGGAACCAAGGTATCCTCCATGGAATGATTTCAAGATGGACTTTGTC
AAATTGGCTTATGATTTTGACTATGTTGGTCTTGTACTGCTCTTGCTGGGGTTGAGAGGA
TTATTCAGAAGAAATCGAAGGCAGTAG

Peptide Sequence

PEP ID

XP_016505808.1
PEP Infomation

PREDICTED: aldehyde dehydrogenase family 3 member F1-like isoform X2 [Nicotiana tabacum]
Sequence

MDRVEEMLGEVRRTFKGGRTRGVEWRKAQLQALLNLLAENEDKIIEALRQDLGKHPVEAY
RDEVGVVKKSATNAFRCVEKWMAPQKGRIPVVFFPARGAVVSEPLGVVLIFASWNFPISL
ALDPVIGAISAGNTVVLKPSDLAPKCSSFLANTIPLYLDPEAIKVVEGGKDISEQLLQLK
WDKIFFTGSPQVARLIMSAAAKHLTPVTLELGGKCPTILDTLSNSSDLQVAVKRIVGGKW
GPCNGQACIGIDYVLVETQFAPVLIELLKKFIKRFYGENLKTLENLARIVNKHHFERVHN
LLKDPNVAATIVYGGSVDEENMVIEPTILLNPPLDAEIMTEEIFGPLLPIITLNTIEESI
QFINSRPKPLAIYAFTKNDSLKEKILQETSSGSLTFNDAIIQFVADTLPFGGVGQSGFGR
YHGKFSFDTFSHEKAVLHRSFLIELEPRYPPWNDFKMDFVKLAYDFDYVGLVLLLLGLRG
LFRRNRRQ

Transcript Sequence

Gene sequence data has not been registered.